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CC2530: Code running on CC2531 but not embedded design

Part Number: CC2530
Other Parts Discussed in Thread: CC2531, , Z-STACK

I can load my hex code into a CC2531 USB dongle code and run my application with this tool. However when I install a hex file built in the same compiler with CC2530 selected and load this into a CC2530 embedded chip my application stalls when attempting to initialize the Zigbee chip.

My gateway is a windows machine, I am connecting to the CC2530 via UART. Is there anything else I need to do in the hex file to enable functionality with the CC2530?

Thank You