QEIs in Velocity mode - not same counts per revolution

I've moved code from the LM3S1968 to the TM4C123BE6PZ. I am using QEI 0 and QEI 1 in Velocity mode. QEI 0 is always half the number of counts of QEI 1 when the encoders travel the same distance. What am I doing wrong/different? Here is the initialization code:

void quadInit (void)
{
    //
    // Configure the encoder A & B pin for use by the QEI block. 
    // The encoders have no Index signal so those inputs are not used.
    //
    ROM_GPIOPinConfigure(GPIO_PF0_PHA0);  // new for TM4C parts
    ROM_GPIOPinConfigure(GPIO_PF1_PHB0);
    ROM_GPIOPinConfigure(GPIO_PG0_PHA1);
    ROM_GPIOPinConfigure(GPIO_PG1_PHB1);
    ROM_GPIOPinTypeQEI(GPIO_PORTF_BASE, GPIO_PIN_0);  // X encoder - channel A
    ROM_GPIOPinTypeQEI(GPIO_PORTF_BASE, GPIO_PIN_1);  // X encoder - channel B
    ROM_GPIOPinTypeQEI(GPIO_PORTG_BASE, GPIO_PIN_0);  // Y encoder - channel A
    ROM_GPIOPinTypeQEI(GPIO_PORTG_BASE, GPIO_PIN_1);  // Y encoder - channel B

    //
    // Configure the QEI block for capturing the velocity of the encoder A
    // pin (which it does by counting the number of edges during a fixed time
    // period).  May get twice the resolution by counting both edges...
    //
    // Assume Regulated stand-up machine until pedal test run
    //
    ROM_QEIConfigure(QEI0_BASE, (QEI_CONFIG_CAPTURE_A_B | QEI_CONFIG_NO_RESET |
                             QEI_CONFIG_STALLEN | QEI_CONFIG_QUADRATURE |
                             QEI_CONFIG_FILTEN | QEI_CONFIG_NO_SWAP), 0xffffffff);
    //
    // Set sample rate (QEI_INT_RATE)
    // (SysCtlClockGet() will return 66.667 MHz.)
    // This confuses me every time I come back to it: xQEI_INT_RATE is
    // how many times per second you want the interrupt to occur.
    // Set up for foot pedal machine
    // If no foot pedal is attached, it will change to regulated machine.
    // If display/handles ask for Presets, it will remain foot pedal machine
    ROM_QEIVelocityConfigure(QEI0_BASE, QEI_VELDIV_1, ROM_SysCtlClockGet()
                             / QEI_INT_RATE);
   
    //
    // Enable the QEI blocks and the velocity capture modes.
    //
    ROM_QEIPositionSet(QEI0_BASE,0);            // set up the absolute position counters
    ROM_QEIVelocityEnable(QEI0_BASE);

   
    ROM_QEIEnable(QEI0_BASE);
   
    // same for QEI1
    //
    ROM_QEIConfigure(QEI1_BASE, (QEI_CONFIG_CAPTURE_A_B | QEI_CONFIG_NO_RESET |
                             QEI_CONFIG_STALLEN | QEI_CONFIG_QUADRATURE |
                             QEI_CONFIG_FILTEN | QEI_CONFIG_NO_SWAP), 0xffffffff);
    ROM_QEIVelocityConfigure(QEI1_BASE, QEI_VELDIV_1, ROM_SysCtlClockGet()
                             / QEI_INT_RATE);

    ROM_QEIPositionSet(QEI1_BASE,0);                  // for Pro-Stitcher record function
    ROM_QEIVelocityEnable(QEI1_BASE);
    ROM_QEIEnable(QEI1_BASE);
 
    //
    // Enable the QEI velocity interrupts.
    //
    ROM_QEIIntEnable(QEI0_BASE, QEI_INTTIMER);
    ROM_QEIIntEnable(QEI1_BASE, QEI_INTTIMER);

    ROM_IntEnable(INT_QEI0);
    ROM_IntEnable(INT_QEI1);
 
}

Any help would be appreciated. For now I am simply doubling the counts on the errant channel but I'd like to do it right.

Thanks!