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programming TMS320F28069 and serial bootloader ??

Other Parts Discussed in Thread: CONTROLSUITE

I used the Instaspin motor control labs to play with my custom board with a TMS320F28069. I can do what I want through JTAG but now my goal is to 

1) program it through some source and make sure the program stays and the board functions on power up ( I am using the Blackhawk USB100v2 JTAG Emulator)

2) Be able to program the board through UART, ( for cases when JTAG is not available). I guess its called a Bootloader. 

I could not find any options on Code Composer Studio for this. Can someone please point me to right applications notes and resources for the same?

thanks