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TMDSHVMTRPFCKIT: Difference between TMDSHVMTRPFCKIT and BoostXl-DRV8301?

Part Number: TMDSHVMTRPFCKIT
Other Parts Discussed in Thread: BOOSTXL-DRV8301

Hello,

I am testing BLDC control with two kits. One of them is TMDSHVMTRPFCKIT with F28069 control card and the other is BoostXl-DRV8301 with F28069 Launchpad. With hall sensor and QEP, I get perfect results with BoostXl-DRV8301, however, with the same code, the TMDSHVMTRPFCKIT shows some strange results. For instance at some points during rotation, it read 0 for all values of hall sensors which is incorrect! Or when I use encoder, the motor accelerates then suddenly decelerates! I am confused because both of these hardware has the same micro-controller, so is there any other configuration for the TMDSHVMTRPFCKIT that is causing this issue?

Regards,

Ata