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Problem with GEL file in CCS ver 4.1.2

Hello:

I have an application where I set different values to a variable via a GEL file. In CCS version 4.1.2, I have to stop my program, select the value via the GEL file, then run the program again, only then I would see the new value being read and used by the program. However, the same application when I run in CCS 3.3 environment, I do not have to stop the program. I can just set the new value via the GEL file while my program is running, and the variable would be loaded with the new value.