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CC1350: CCS programming as expected but Uniflash overwrites user flash

Part Number: CC1350
Other Parts Discussed in Thread: UNIFLASH

I'm trying to resolve an issue where I am erasing the flash memory of my devices when I program them through Uniflash.

When I debug in CCS the program is flashed and any parameters stored on the device's NVS is retained. When using the .hex file and Uniflash to program the device it completely erases all parameters previously stored in NVS. 

I can go back to use earlier .hex files and they seem to avoid the erasing issue with uniflash, so I can only assume it is something I have recently done to cause this. The only thing I have altered recently is the debug configuration to allow me to connect to a running target. I have since returned this to how it was before (I think).

Can anyone help me resolve this problem?

Thanks