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TMDS181RGZEVM: No eyescan output at certain resolutions

Part Number: TMDS181RGZEVM
Other Parts Discussed in Thread: TMDS181

While using this evaluation module, at certain resolutions we don't get an output on the eyescan tool. We are getting output to a monitor, but there is not output on the eyescan tool. The only difference I'm noticing in the status menu is the PLL Status Registers are different and then the clocks are different. The clock I assume is due the lower resolution, but the PLL Status I'm not sure.