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Code not executing on TM4C1294NCPDT

Other Parts Discussed in Thread: TM4C1294NCPDT

I am using Tiva TM4C1294NCPDT on a custom board. The microcontroller can run code only when there is a pullup on the UART5 RX pin. This might be most likely a biasing issue but has anyone encountered something similar before or can you suggest any tests I can run to find out what is the issue. Without the pullup the code does not execute. Please suggest some steps to verify if my MCU power is alright. I realised that the pullup on the UART pin makes the code run only because I was using that UART for sending debug trace messages to my PC and the code was executing only when I connected the UART-USB converter.