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Tiva C Microcontroller Running hot

Other Parts Discussed in Thread: EK-TM4C123GXL

My Tiva C is running very hot recently (not sure why), even though I executed different programs (ex. blinky). I have removed the R9 and R10 resistor couple of month ago but I have only encountered this problem recently. I have also checked for short-circuit but I cant find any at the moment. 

Is this problem caused by removal of R9 and R10 resistor? If so, how does the removal of those resistor cause the microcontroller (the one in the center of Tiva C) run hot?

Thanks,