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EK-TM4C123GXL: Using PF0 as a GPIO Output instead of WAKE

Part Number: EK-TM4C123GXL

I have a project that I'm using the EK-TM4C123GXL Launchpad on. I've got an LED connected to PF0 via the P2 header (Pin 4).  When I laid out the PCB I missed that this gpio was used for the external wake on GPIO function of the launchpad.  There is a pullup on the launchpad connected to USER SW2 (pushing the switch shorts to GND and pulls the WAKE pin down. ) When I realized this, I looked at the schematic of the launchpad and it looks like there is a 0 Ohm resister, R1, that connects PF0 to the pull-up and switch.  So, I removed R1 from the Launchpad, but Pin 4 is still always logic HIGH.    I'm using PF1 for a second LED that works fine.  The code is the same for both (using the DRV LIB to configure as an output and then GPIOPinWrite() to set the state.  As I said, the LED on PF1 works fine and when R1 was still connected, I could push USR SW2 and the LED would go out.  (I've got he LED on a MOSFET), so there is a 5V pullup on the gate side which is connected to the PF0 output.  

Is the published schematic correct for the EK-TM4C123GXL?  Is R1 the correct jumper to remove?