PROCESSOR-SDK-AM62A: Setup error on docker condition

Ryuuichi machida

Hello,

I'm trying to make environment to build custom model for AM62A.
https://github.com/TexasInstruments/edgeai-tidl-tools/tree/09_00_00_06

I'm refering to above URL information, and create docker container environment.
When I perfrom "source .setup.sh" on docker container, I got following error.

--
Failed to build onnx
ERROR: Could not build wheels for onnx, which is required to install pyproject.toml-based projects
--

Attached is my log which I performed "setup.sh".
Is it possible to comment about how I can avoid above error ?

Best Regards,

Fullscreen Docker_Setup_Error.txt Download

root@fbb8d7bc0713:/home/root# source ./setup.sh --skip_cpp_deps
X64 Architecture
Installing python packages...
Requirement already satisfied: pybind11[global] in /usr/local/lib/python3.10/dist-packages (2.11.1)
Requirement already satisfied: pybind11-global==2.11.1 in /usr/local/lib/python3.10/dist-packages (from pybind11[global]) (2.11.1)
WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
Collecting https://github.com/TexasInstruments/onnx/archive/tidl-j7.zip (from -r ./requirements_pc.txt (line 4))
  Using cached https://github.com/TexasInstruments/onnx/archive/tidl-j7.zip
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Installing backend dependencies ... done
  Preparing metadata (pyproject.toml) ... done
Collecting git+https://github.com/kumardesappan/caffe2onnx (from -r ./requirements_pc.txt (line 16))
  Cloning https://github.com/kumardesappan/caffe2onnx to /tmp/pip-req-build-br7qg78a
  Running command git clone --filter=blob:none --quiet https://github.com/kumardesappan/caffe2onnx /tmp/pip-req-build-br7qg78a
  Resolved https://github.com/kumardesappan/caffe2onnx to commit b7e73feed3bbc5ddbdf25b87af93a2bae596055d
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  Downloading pytz-2023.3-py2.py3-none-any.whl (502 kB)
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Collecting mpmath>=0.19
  Downloading mpmath-1.3.0-py3-none-any.whl (536 kB)
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Building wheels for collected packages: onnx, caffe2onnx, lit
  Building wheel for onnx (pyproject.toml) ... error
  error: subprocess-exited-with-error

  × Building wheel for onnx (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [81 lines of output]
      fatal: not a git repository (or any of the parent directories): .git
      /usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'license-file' will not be supported in future versions. Please use the underscore name 'license_file' instead
        warnings.warn(
      running bdist_wheel
      running build
      running build_py
      running create_version
      running cmake_build
      -- The C compiler identification is GNU 11.4.0
      -- The CXX compiler identification is GNU 11.4.0
      -- Detecting C compiler ABI info
      -- Detecting C compiler ABI info - done
      -- Check for working C compiler: /usr/bin/cc - skipped
      -- Detecting C compile features
      -- Detecting C compile features - done
      -- Detecting CXX compiler ABI info
      -- Detecting CXX compiler ABI info - done
      -- Check for working CXX compiler: /usr/bin/c++ - skipped
      -- Detecting CXX compile features
      -- Detecting CXX compile features - done
      -- Found PythonInterp: /usr/bin/python3 (found version "3.10.12")
      -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.10.so (found version "3.10.12")
      Generated: /tmp/pip-req-build-0qjq49xs/.setuptools-cmake-build/onnx/onnx-ml.proto
      CMake Error at CMakeLists.txt:292 (message):
        Protobuf compiler not found
      Call Stack (most recent call first):
        CMakeLists.txt:323 (relative_protobuf_generate_cpp)


      -- Configuring incomplete, errors occurred!
      See also "/tmp/pip-req-build-0qjq49xs/.setuptools-cmake-build/CMakeFiles/CMakeOutput.log".
      Traceback (most recent call last):
        File "/usr/lib/python3/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 363, in <module>
          main()
        File "/usr/lib/python3/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 345, in main
          json_out['return_val'] = hook(**hook_input['kwargs'])
        File "/usr/lib/python3/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 261, in build_wheel
          return _build_backend().build_wheel(wheel_directory, config_settings,
        File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 230, in build_wheel
          return self._build_with_temp_dir(['bdist_wheel'], '.whl',
        File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 215, in _build_with_temp_dir
          self.run_setup()
        File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 267, in run_setup
          super(_BuildMetaLegacyBackend,
        File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 158, in run_setup
          exec(compile(code, __file__, 'exec'), locals())
        File "setup.py", line 337, in <module>
          setuptools.setup(
        File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 153, in setup
          return distutils.core.setup(**attrs)
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py", line 148, in setup
          return run_commands(dist)
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py", line 163, in run_commands
          dist.run_commands()
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 967, in run_commands
          self.run_command(cmd)
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command
          cmd_obj.run()
        File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 299, in run
          self.run_command('build')
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py", line 313, in run_command
          self.distribution.run_command(command)
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command
          cmd_obj.run()
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build.py", line 135, in run
          self.run_command(cmd_name)
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py", line 313, in run_command
          self.distribution.run_command(command)
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command
          cmd_obj.run()
        File "setup.py", line 233, in run
          self.run_command('cmake_build')
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py", line 313, in run_command
          self.distribution.run_command(command)
        File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 986, in run_command
          cmd_obj.run()
        File "setup.py", line 219, in run
          subprocess.check_call(cmake_args)
        File "/usr/lib/python3.10/subprocess.py", line 369, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['/usr/bin/cmake', '-DPYTHON_INCLUDE_DIR=/usr/include/python3.10', '-DPYTHON_EXECUTABLE=/usr/bin/python3', '-DBUILD_ONNX_PYTHON=ON', '-DCMAKE_EXPORT_COMPILE_COMMANDS=ON', '-DONNX_NAMESPACE=onnx', '-DPY_EXT_SUFFIX=.cpython-310-x86_64-linux-gnu.so', '-DCMAKE_BUILD_TYPE=Release', '-DONNX_ML=1', '/tmp/pip-req-build-0qjq49xs']' returned non-zero exit status 1.
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for onnx
  Building wheel for caffe2onnx (setup.py) ... done
  Created wheel for caffe2onnx: filename=caffe2onnx-1.0.2-py3-none-any.whl size=98860 sha256=f92ef179f3f7a000e52abf5e1f9e1d65ab64d545257400c2953c261590c20945
  Stored in directory: /tmp/pip-ephem-wheel-cache-xfi4xrp2/wheels/7d/61/53/92a634cbbb23f4c9853c5dc4a4a29a6046150d768973b746bb
  Building wheel for lit (pyproject.toml) ... done
  Created wheel for lit: filename=lit-16.0.6-py3-none-any.whl size=93605 sha256=e9ee796188c66128ffb8d603c291e2dc29a975e37bea3da253913135ec30302b
  Stored in directory: /root/.cache/pip/wheels/14/f9/07/bb2308587bc2f57158f905a2325f6a89a2befa7437b2d7e137
Successfully built caffe2onnx lit
Failed to build onnx
ERROR: Could not build wheels for onnx, which is required to install pyproject.toml-based projects
Requirement already satisfied: pybind11[global] in /usr/local/lib/python3.10/dist-packages (2.11.1)
Requirement already satisfied: pybind11-global==2.11.1 in /usr/local/lib/python3.10/dist-packages (from pybind11[global]) (2.11.1)
WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
Installing python osrt packages...
WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
skipping gcc-arm-9.2-2019.12-x86_64-aarch64-none-linux-gnu download: found /home/root/gcc-arm-9.2-2019.12-x86_64-aarch64-none-linux-gnu
CGT7X_ROOT already set to /home/root/ti-cgt-c7000_3.1.0.LTS, skipping download
root@fbb8d7bc0713:/home/root#

over 2 years ago

0 Ryuuichi machida over 2 years ago

Guru 12970 points

Hello,

I'm sorry I solved this issue by myself. The root cause was due to my environment.
By the way, when I try to perform "cmake ../examples && make -j && cd .." after performing "setup.sh" on docker condition, I got following error.

*
In file included from /home/root/examples/osrt_cpp/ort/onnx_main.cpp:63:
/home/root/examples/osrt_cpp/ort/onnx_main.h:81:10: fatal error: itidl_rt.h: No such file or directory

Have you ever observed above error ?

Best Regards,

0 Qutaiba Saleh over 2 years ago in reply to Ryuuichi machida

TI__Expert 4930 points

Hello,

Thanks for your post. I'm sorry but the best person to respond to this is out of office for a few days and will reply later this week.

Thanks.

0 Ryuuichi machida over 2 years ago in reply to Qutaiba Saleh

Guru 12970 points

Hello,

I could solve my above cmake error.
The reason is related "RUN bash -c" code of dockerfile.
When I build dockerfile, it seems that setting of "RUN bash -c" code did not work correctly.
So, there were a lot of "command" and "package" which were not installed when docker was built.

I solve this by performing "apt-get" and "pip3" command which is described in dockerfile manually.
However, I would like to confirm the reason why when I performed "sudo docker build -f Dockerfile -t x86_ubuntu_22 .", "RUN bash -c" did not work correctly.
Do you have any idea ?

BR,

0 Reese Grimsley over 2 years ago in reply to Ryuuichi machida

TI__Genius 16936 points

Hi Machida-san,

I am glad you were able to manually resolve this issue. It is not immediately clear why this docker-build command did not run the line it failed on. I'm reassigning this to someone on the development team who would have insight on the docker setup process -- I'll also file a bug so they are aware of the issue.

Could you provide some info on the machine you were running this on, such as the operating system and version of python, docker, cmake, etc.?

Best,
Reese

0 Ryuuichi machida over 2 years ago in reply to Reese Grimsley

Guru 12970 points

Hello,

Sorry for my late reply.

>Could you provide some info on the machine you were running this on, such as the operating system and version of python, docker, cmake, etc.?
I use ubuntu22.04(64bit) with virtual machine.
Python version is 3.10 (As I previously said, I refer tag version 09_00_00_06. This said user use ver 3.10 for python.)
Docker is "docker.io" (Previously, I use docker-ce, but I have something fail, so I changed to this as you said in document.)

Best Regards,

0 Reese Grimsley over 2 years ago in reply to Ryuuichi machida

TI__Genius 16936 points

Hi Machida-san,

I'm noticing in the logs that you had posted that protobuf-compiler is not installed. That's something that we may need to add to the dockerfile if it's not already there. In the meantime, you can try running:

```

sudo apt install libprotobuf-dev protobuf-compiler

```

to cover those dependencies, and then try to rerun the setup script, please

Best,

Reese

0 Ryuuichi machida over 2 years ago in reply to Reese Grimsley

Guru 12970 points

Hello,

Attached is my latest log.
At first, please see line 2, I did build docker.
Then, I confirmed that it seems that "RUN bash -c" does not work correctly. (Especially, Step 7/10 and 9/10 are important, but pip3 and apt-get does not work.)
After that, I also confirmed that "wget" did not work correctly (please see line 41), so I performed "apt-get" and "pip3" manually as I said previous thread.
(Please see line 56 and line 1672 and line 1682.)

>sudo apt install libprotobuf-dev protobuf-compiler
I did it on line 56 of attached file.

Again, the question is I'm not sure why Step 7/10 and 9/10 did not work correctly.
(In my condition, if I exit docker, when I re-launch docker, I need to re-install these package...)

Best regards,

Lasest_Log_forE2E--20230912.txt

0 kumar.desappan over 2 years ago in reply to Ryuuichi machida

TI__Mastermind 22145 points

Can you try with tip of master in github now.

Please refer below colab notebook which validates the AM62a based edgeia-tidl-tools setup

https://github.com/kumardesappan/colab-notebooks/blob/main/ti_edgeai_tidl_tools_9.0_am62a.ipynb

Processors

Processors forum

PROCESSOR-SDK-AM62A: Setup error on docker condition