WebServer Application from IAR not working correctly

I have the WebServer Application running successfully with the Binary, but when I have the files compiled in IAR workbench it does not give me the same results. 

The LED's do not light up in the same manner. It goes through first time configuration without issues. But once a connection is established, sometimes only LED's 1, 2 and 3 light up. And at times LED1-5 light up, this is after pressing the reset button a few times and cycling power. But despite that, I am not able to access the Server's webpage. IAR builds the workspace without warnings and errors. So i'm not sure if this is an error with the program or if I am using the wrong technique to build it. I did follow all the steps in the wiki but to no avail.