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RTOS/TMS320F28335: C2000 real time with matlab/simulink / real time resolution problem

Part Number: TMS320F28335
Other Parts Discussed in Thread: ENERGIA

Tool/software: TI-RTOS

hello 
i am using tms320f28335 experimental kit / CCSv6 for real time implementation of MATLAB simulink model.
build, load and run is successful .
But the problem is :

output, as we see in the scope of simulink model is not accurate as that of DSO (digital signal oscilloscope).
I mean the output at the pins of experimantal board is not same as that of scope of simulink model.

Actually the time resolution is not same

waveform of pulses that came in 0.02 sec in simulink scope is actually coming in more that 5 sec on the DSO.

I think dsp processor is taking long time to run the model. In this case real time implementation is not possible.

Please suggest, what can be done

Thanks
satwant